private OWLAnnotationProperty trSynonymType(String type) { if (type.equals(OboFormatTag.TAG_RELATED.getTag()) || type.equals(OboFormatTag.TAG_EXACT.getTag()) || type.equals(OboFormatTag.TAG_NARROW.getTag()) || type.equals(OboFormatTag.TAG_BROAD.getTag())) { return trTagToAnnotationProp(type); } return trAnnotationProp(type); }
OWLAnnotationProperty prop = trAnnotationProp((String)v); OWLAnnotationValue value = trAnnotationProp(v2.toString()).getIRI(); OWLAnnotation ontAnn = fac.getOWLAnnotation(prop, value, annotations); AddOntologyAnnotation addAnn = new AddOntologyAnnotation(owlOntology, ontAnn); OWLAnnotationProperty prop = trAnnotationProp((String)v); OWLAnnotation ontAnn = fac.getOWLAnnotation(prop, value, annotations); AddOntologyAnnotation addAnn = new AddOntologyAnnotation(owlOntology, ontAnn);
OWLAnnotation ann = fac.getOWLAnnotation(trAnnotationProp(IRI_PROP_isReversiblePropertyChain), trLiteral("true")); annotations.add(ann);
trTagToAnnotationProp(tag), sub, trAnnotationProp(v.toString()).getIRI(), annotations); trAnnotationProp((String)v), sub, trAnnotationProp(v2.toString()).getIRI(), annotations); trAnnotationProp((String)v), sub, value, OWLAnnotation ann= fac.getOWLAnnotation(trTagToAnnotationProp(OboFormatTag.TAG_HAS_SYNONYM_TYPE.getTag()), trAnnotationProp(values[2].toString()).getIRI()); annotations.add(ann);
OWLAnnotationProperty p = trAnnotationProp(id); add(fac.getOWLDeclarationAxiom(p));
OWLAnnotationProperty childAnnotProp = trAnnotationProp( clause.getValue(String.class) ); Set<OWLAnnotation> annotations = trAnnotations(clause); add(fac.getOWLSubAnnotationPropertyOfAxiom(childAnnotProp, parentAnnotProp, annotations)); OWLAnnotationProperty childAnnotProp = trAnnotationProp( values[0].toString() ); IRI childIRI = childAnnotProp.getIRI();