/** * Creates a new {@link Species} inside this {@link Model} and returns it. * * @param id * the id of the new element to create * @return the {@link Species} object created */ public Species createSpecies(String id) { Species species = new Species(id, getLevel(), getVersion()); addSpecies(species); return species; }
Species species = (Species) newContextObject; species.initDefaults(); model.addSpecies(species); Species species = (Species) newContextObject; species.initDefaults(); model.addSpecies(species);
subModel.addSpecies(relatedSpecies.clone()); processUnitsMap(unitsMap, model, relatedSpecies.getSubstanceUnits());
private void addSBaseToModel(Model model, SBase sBase) { if (model != null && sBase != null) { sBase.removeFromParent(); if (sBase.getClass() == Reaction.class) { model.addReaction((Reaction) sBase); } else if (sBase.getClass() == Compartment.class) { model.addCompartment((Compartment) sBase); } else if (sBase.getClass() == Constraint.class) { model.addConstraint((Constraint) sBase); } else if (sBase.getClass() == Event.class) { model.addEvent((Event) sBase); } else if (sBase.getClass() == FunctionDefinition.class) { model.addFunctionDefinition((FunctionDefinition) sBase); } else if (sBase.getClass() == Parameter.class) { model.addParameter((Parameter) sBase); } else if (sBase.getClass() == Rule.class) { model.addRule((Rule) sBase); } else if (sBase.getClass() == Species.class) { model.addSpecies((Species) sBase); } else if (sBase.getClass() == UnitDefinition.class) { model.addUnitDefinition((UnitDefinition) sBase); } } }
targetModel.addSpecies(species.clone());