/** * Gets the term frame. * * @param entity the entity * @return the term frame */ protected Frame getTermFrame(OWLClass entity) { String id = getIdentifier(entity.getIRI()); return getTermFrame(id); }
/** * Gets the term frame. * * @param entity the entity * @return the term frame */ protected Frame getTermFrame(OWLClass entity) { String id = getIdentifier(entity.getIRI()); return getTermFrame(id); }
/** * Gets the term frame. * * @param entity the entity * @return the term frame */ protected Frame getTermFrame(OWLClass entity) { String id = getIdentifier(entity.getIRI()); return getTermFrame(id); }
/** * Gets the term frame. * * @param entity the entity * @return the term frame */ protected Frame getTermFrame(OWLClass entity) { String id = getIdentifier(entity.getIRI()); return getTermFrame(id); }
private void addAltId(String replacedBy, String altId, boolean isClass, boolean isProperty) { Frame replacedByFrame = null; if (isClass) { replacedByFrame = getTermFrame(replacedBy); } else if (isProperty) { replacedByFrame = getTypedefFrame(replacedBy); } if (replacedByFrame != null) { boolean addClause = true; // check existing alt_ids to avoid duplicate clauses Collection<Clause> existing = replacedByFrame.getClauses(OboFormatTag.TAG_ALT_ID); for (Clause clause : existing) { if (altId.equals(clause.getValue(String.class))) { addClause = false; } } if (addClause) { replacedByFrame.addClause(new Clause(OboFormatTag.TAG_ALT_ID, altId)); } } }
private void addAltId(String replacedBy, String altId, boolean isClass, boolean isProperty) { Frame replacedByFrame = null; if (isClass) { replacedByFrame = getTermFrame(replacedBy); } else if (isProperty) { replacedByFrame = getTypedefFrame(replacedBy); } if (replacedByFrame != null) { boolean addClause = true; // check existing alt_ids to avoid duplicate clauses Collection<Clause> existing = replacedByFrame.getClauses(OboFormatTag.TAG_ALT_ID); for (Clause clause : existing) { if (altId.equals(clause.getValue(String.class))) { addClause = false; } } if (addClause) { replacedByFrame.addClause(new Clause(OboFormatTag.TAG_ALT_ID, altId)); } } }
private void addAltId(String replacedBy, String altId, boolean isClass, boolean isProperty) { Frame replacedByFrame = null; if (isClass) { replacedByFrame = getTermFrame(replacedBy); } else if (isProperty) { replacedByFrame = getTypedefFrame(replacedBy); } if (replacedByFrame != null) { boolean addClause = true; // check existing alt_ids to avoid duplicate clauses Collection<Clause> existing = replacedByFrame.getClauses(OboFormatTag.TAG_ALT_ID); for (Clause clause : existing) { if (altId.equals(clause.getValue(String.class))) { addClause = false; } } if (addClause) { replacedByFrame.addClause(new Clause(OboFormatTag.TAG_ALT_ID, altId)); } } }
private void addAltId(String replacedBy, String altId, boolean isClass, boolean isProperty) { Frame replacedByFrame = null; if (isClass) { replacedByFrame = getTermFrame(replacedBy); } else if (isProperty) { replacedByFrame = getTypedefFrame(replacedBy); } if (replacedByFrame != null) { boolean addClause = true; // check existing alt_ids to avoid duplicate clauses Collection<Clause> existing = replacedByFrame.getClauses(OboFormatTag.TAG_ALT_ID); for (Clause clause : existing) { if (altId.equals(clause.getValue(String.class))) { addClause = false; } } if (addClause) { replacedByFrame.addClause(new Clause(OboFormatTag.TAG_ALT_ID, altId)); } } }
f = getTermFrame(entity.asOWLClass()); } else if (isObjectProperty) { f = getTypedefFrame(entity.asOWLObjectProperty());
f = getTermFrame(entity.asOWLClass()); } else if (isObjectProperty) { f = getTypedefFrame(entity.asOWLObjectProperty());
f = getTermFrame(entity.asOWLClass()); } else if (isObjectProperty) { f = getTypedefFrame(entity.asOWLObjectProperty());
Frame f = getTermFrame(cls1); Clause c = new Clause(OboFormatTag.TAG_DISJOINT_FROM.getTag()); c.setValue(cls2);
f = getTermFrame(entity.asOWLClass()); } else if (isObjectProperty) { f = getTypedefFrame(entity.asOWLObjectProperty());
Frame f = getTermFrame(cls1); Clause c = new Clause(OboFormatTag.TAG_DISJOINT_FROM.getTag()); c.setValue(cls2);
Frame f = getTermFrame(cls1); Clause c = new Clause(OboFormatTag.TAG_DISJOINT_FROM.getTag()); c.setValue(cls2);
Frame f = getTermFrame(cls1); Clause c = new Clause(OboFormatTag.TAG_DISJOINT_FROM.getTag()); c.setValue(cls2);
Frame f = getTermFrame(ce1.asOWLClass()); boolean isUntranslateable = false; List<Clause> equivalenceAxiomClauses = new ArrayList<>();
Frame f = getTermFrame((OWLClass) sub); if (sup instanceof OWLClass) { Clause c = new Clause(OboFormatTag.TAG_IS_A.getTag());
Frame f = getTermFrame((OWLClass) sub); if (sup instanceof OWLClass) { Clause c = new Clause(OboFormatTag.TAG_IS_A.getTag());
Frame f = getTermFrame((OWLClass) sub); if (sup instanceof OWLClass) { Clause c = new Clause(OboFormatTag.TAG_IS_A.getTag());