@GetMapping("/uml") public String getUml(@RequestParam(value = "package") String selectedPackageName, Model model) { Package molgenisPackage = metaDataService.getPackage(selectedPackageName); if (molgenisPackage != null) { model.addAttribute("molgenisPackage", molgenisPackage); } return "view-standardsregistry_uml"; }
@GetMapping("/documentation/{packageName}") public String getModelDocumentation(@PathVariable("packageName") String packageName, @RequestParam(value = "embed", required = false) Boolean embed, Model model) { Package aPackage = metaDataService.getPackage(packageName); model.addAttribute("package", aPackage); model.addAttribute("tagService", tagService); return VIEW_NAME_DOCUMENTATION_EMBED; }
@GetMapping("/getTreeData") @ResponseBody public Collection<PackageTreeNode> getTree(@RequestParam(value = "package") String packageName) { Package molgenisPackage = metaDataService.getPackage(packageName); if (molgenisPackage == null) return null; return Collections.singletonList(createPackageTreeNode(molgenisPackage)); }
private List<PackageResponse.Entity> getEntitiesInPackage(String packageName) { List<PackageResponse.Entity> entiesForThisPackage = new ArrayList<>(); Package aPackage = metaDataService.getPackage(packageName); getEntitiesInPackageRec(aPackage, entiesForThisPackage); return entiesForThisPackage; }
private Package getPackage(@Nullable String targetPackageId) { return targetPackageId != null ? metadataService .getPackage(targetPackageId) .orElseThrow(() -> new UnknownPackageException(targetPackageId)) : null; }
private Package getPackage(String id) { return metaDataService.getPackage(id).orElseThrow(() -> new UnknownPackageException(id)); }
@GetMapping("/details") public String showView(@RequestParam(value = "package", required = false) String selectedPackageName, Model model) { if (selectedPackageName == null) { List<Package> packages = Lists.newArrayList(metaDataService.getRootPackages()); selectedPackageName = packages.get(0).getId(); } model.addAttribute("tagService", tagService); model.addAttribute("selectedPackageName", selectedPackageName); model.addAttribute("package", metaDataService.getPackage(selectedPackageName)); return VIEW_NAME_DETAILS; }
private Package getPackage(String id) { return dataService.getMeta().getPackage(id).orElseThrow(() -> new UnknownPackageException(id)); } }
try { File tmpFile = fileLocationToStoredRenamedFile(url, entityTypeId); if (packageId != null && !dataService.getMeta().getPackage(packageId).isPresent()) { return ResponseEntity.badRequest() .contentType(TEXT_PLAIN)
@GetMapping("/getPackage") @ResponseBody public PackageResponse getPackage(@RequestParam(value = "package") String packageName) { Package molgenisPackage = metaDataService.getPackage(packageName); if (molgenisPackage == null) return null; return new PackageResponse(molgenisPackage.getId(), molgenisPackage.getLabel(), molgenisPackage.getDescription(), null, getEntitiesInPackage(molgenisPackage.getId()), getTagsForPackage(molgenisPackage)); }
private Package getRootPackage(EntityType entityType) { Package packageEntity = entityType.getEntity(EntityTypeMetadata.PACKAGE, Package.class); if (packageEntity != null) { String packageName = packageEntity.getId(); if (packageName != null) { Package p = metaDataService.getPackage(packageName); if (p != null) { return p.getRootPackage(); } } } return null; }
dataService .getMeta() .getPackage(packageId) .orElseThrow( () -> new MolgenisDataException("No package found with ID " + packageId));
Package package_ = dataService.getMeta().getPackage(packageId); if (package_ == null)
if (packageId != null && !dataService.getMeta().getPackage(packageId).isPresent()) { return ResponseEntity.badRequest() .contentType(TEXT_PLAIN)
EntityType createTargetMetadata(MappingTarget mappingTarget, String entityTypeId, String packageId, String label, Boolean addSourceAttribute) { EntityType targetMetadata = EntityType.newInstance(mappingTarget.getTarget(), DEEP_COPY_ATTRS, attrMetaFactory); targetMetadata.setId(entityTypeId); if (label != null) { targetMetadata.setLabel(label); } else { targetMetadata.setLabel(entityTypeId); } if (TRUE.equals(addSourceAttribute)) { targetMetadata.addAttribute(attrMetaFactory.create().setName(SOURCE)); } if (packageId == null) { targetMetadata.setPackage(defaultPackage); } else { targetMetadata.setPackage(dataService.getMeta().getPackage(packageId)); } return targetMetadata; }
Package aPackage = metaDataService .getPackage(fullyQualifiedPackageName) .orElseGet(() -> createPackage(fullyQualifiedPackageName));
dataService .getMeta() .getPackage(packageId) .orElseThrow(() -> new UnknownEntityException(PACKAGE, packageId)); targetMetadata.setPackage(aPackage);