public Length getPixelsPhysicalSizeX(int imageIndex) { // Parents: {u'Image': {u'OME': None}} // PhysicalSizeX is not a reference return root.getImage(imageIndex).getPixels().getPhysicalSizeX(); }
public Length getPixelsPhysicalSizeX(int imageIndex) { // Parents: {u'Image': {u'OME': None}} // PhysicalSizeX is not a reference return root.getImage(imageIndex).getPixels().getPhysicalSizeX(); }
@Test (groups = {"11-06-u-image"}, dependsOnMethods = {"testImage0Name"}) public void testPixels0() { Assert.assertNotNull(image0); pixels0 = image0.getPixels(); Assert.assertEquals(3, pixels0.sizeOfBinDataList()); Assert.assertEquals(3, pixels0.sizeOfChannelList()); Assert.assertEquals(0, pixels0.sizeOfPlaneList()); Assert.assertEquals(0, pixels0.sizeOfTiffDataList()); Assert.assertEquals(ref.Image0Pixels0_0DimensionOrder, pixels0.getDimensionOrder()); Assert.assertEquals(ref.Image0Pixels0_0PhysicalSizeX, pixels0.getPhysicalSizeX()); Assert.assertEquals(ref.Image0Pixels0_0PhysicalSizeY, pixels0.getPhysicalSizeY()); Assert.assertEquals(ref.Image0Pixels0_0Type, pixels0.getType()); Assert.assertEquals(ref.Image0Pixels0_0SizeC, pixels0.getSizeC()); Assert.assertEquals(ref.Image0Pixels0_0SizeT, pixels0.getSizeT()); Assert.assertEquals(ref.Image0Pixels0_0SizeX, pixels0.getSizeX()); Assert.assertEquals(ref.Image0Pixels0_0SizeY, pixels0.getSizeY()); Assert.assertEquals(ref.Image0Pixels0_0SizeZ, pixels0.getSizeZ()); Assert.assertNull(pixels0.getMetadataOnly()); Assert.assertNull(pixels0.getPhysicalSizeZ()); Assert.assertNull(pixels0.getTimeIncrement()); }
@Test (groups = {"11-06-i-image"}, dependsOnMethods = {"testImage0Name"}) public void testPixels0() { Assert.assertNotNull(image0); pixels0 = image0.getPixels(); Assert.assertEquals(1, pixels0.sizeOfBinDataList()); Assert.assertEquals(1, pixels0.sizeOfChannelList()); Assert.assertEquals(0, pixels0.sizeOfPlaneList()); Assert.assertEquals(0, pixels0.sizeOfTiffDataList()); Assert.assertEquals(ref.Image0Pixels0_0DimensionOrder, pixels0.getDimensionOrder()); Assert.assertEquals(ref.Image0Pixels0_0PhysicalSizeX, pixels0.getPhysicalSizeX()); Assert.assertEquals(ref.Image0Pixels0_0PhysicalSizeY, pixels0.getPhysicalSizeY()); Assert.assertEquals(ref.Image0Pixels0_0Type, pixels0.getType()); Assert.assertEquals(ref.Image0Pixels0_0SizeC, pixels0.getSizeC()); Assert.assertEquals(ref.Image0Pixels0_0SizeT, pixels0.getSizeT()); Assert.assertEquals(ref.Image0Pixels0_0SizeX, pixels0.getSizeX()); Assert.assertEquals(ref.Image0Pixels0_0SizeY, pixels0.getSizeY()); Assert.assertEquals(ref.Image0Pixels0_0SizeZ, pixels0.getSizeZ()); Assert.assertNull(pixels0.getMetadataOnly()); Assert.assertNull(pixels0.getPhysicalSizeZ()); Assert.assertNull(pixels0.getTimeIncrement()); }
@Test public void validateUpgrade() throws ServiceException { assertEquals(1, ome.sizeOfImageList()); Image image = ome.getImage(0); Pixels pixels = image.getPixels(); // Pixels physical sizes are restricted to positive values PositiveFloat positiveFloatValue = new PositiveFloat(10000.0); assertEquals(FormatTools.createLength(positiveFloatValue, UNITS.MICROMETER), pixels.getPhysicalSizeX()); assertEquals(FormatTools.createLength(positiveFloatValue, UNITS.MICROMETER), pixels.getPhysicalSizeY()); assertNull(pixels.getPhysicalSizeZ()); }