- create
Create a new Allele that includes bases and if tagged as the reference allele if
isRef == true. If b
- getBaseString
Return the DNA bases segregating in this allele in String format. This is
useful, because toString()
- getDisplayString
Return the printed representation of this allele. Same as getBaseString(),
except for symbolic allel
- length
- getBases
Return the DNA bases segregating in this allele. Note this isn't reference
polarized, so the Null al
- equals
- isReference
- isNoCall
- isSymbolic
- toString
- basesMatch
- isNonReference