public Component createComponent(Interaction interaction, Interactor interactor, CvExperimentalRole expRole, CvBiologicalRole bioRole) { Component component = new Component(getInstitution(), interaction, interactor, expRole, bioRole); CvIdentification cvParticipantDetMethod = createCvObject(CvIdentification.class, CvIdentification.PREDETERMINED_MI_REF, CvIdentification.PREDETERMINED); component.getParticipantDetectionMethods().add(cvParticipantDetMethod); CvExperimentalPreparation cvExperimentalPreparation = createCvObject(CvExperimentalPreparation.class, CvExperimentalPreparation.PURIFIED_REF, CvExperimentalPreparation.PURIFIED); component.getExperimentalPreparations().add(cvExperimentalPreparation); return component; }
public Component createComponent(Interaction interaction, Interactor interactor, CvExperimentalRole expRole, CvBiologicalRole bioRole) { Component component = new Component(getInstitution(), interaction, interactor, expRole, bioRole); CvIdentification cvParticipantDetMethod = createCvObject(CvIdentification.class, CvIdentification.PREDETERMINED_MI_REF, CvIdentification.PREDETERMINED); component.getParticipantDetectionMethods().add(cvParticipantDetMethod); CvExperimentalPreparation cvExperimentalPreparation = createCvObject(CvExperimentalPreparation.class, CvExperimentalPreparation.PURIFIED_REF, CvExperimentalPreparation.PURIFIED); component.getExperimentalPreparations().add(cvExperimentalPreparation); ComponentParameter componentParameter = createDeterministicComponentParameter(); component.addParameter(componentParameter); interactor.addActiveInstance( component ); interaction.addComponent( component ); return component; }
public Component createComponent(Interaction interaction, Interactor interactor, CvExperimentalRole expRole, CvBiologicalRole bioRole) { Component component = new Component(getInstitution(), interaction, interactor, expRole, bioRole); CvIdentification cvParticipantDetMethod = createCvObject(CvIdentification.class, CvIdentification.PREDETERMINED_MI_REF, CvIdentification.PREDETERMINED); component.getParticipantDetectionMethods().add(cvParticipantDetMethod); CvExperimentalPreparation cvExperimentalPreparation = createCvObject(CvExperimentalPreparation.class, CvExperimentalPreparation.PURIFIED_REF, CvExperimentalPreparation.PURIFIED); component.getExperimentalPreparations().add(cvExperimentalPreparation); ComponentParameter componentParameter = createDeterministicComponentParameter(); component.addParameter(componentParameter); interactor.addActiveInstance( component ); interaction.addComponent( component ); return component; }
private Component newComponent(Participant participant) { Component component = new Component();
Component component = new Component(institution, interaction, interactor, intactExpRoles.iterator().next(), biologicalRole);
final Component component = new Component(IntactContext.getCurrentInstance().getInstitution(), interaction, protein, role ); IntactContext.getCurrentInstance().getDataContext().getDaoFactory().getComponentDao().persist( component );
final Component component = new Component(IntactContext.getCurrentInstance().getInstitution(), interaction, protein, role ); IntactContext.getCurrentInstance().getDataContext().getDaoFactory().getComponentDao().persist( component );
final Component component = new Component(IntactContext.getCurrentInstance().getInstitution(), interaction, protein, expRole, bioRole ); IntactContext.getCurrentInstance().getDataContext().getDaoFactory().getComponentDao().persist( component );
public Component cloneComponent(Component component) throws IntactClonerException { if (component == null) return null; Component clone = new Component();
public Component cloneComponent(Component component) throws IntactClonerException { if (component == null) return null; Component clone = new Component();