Set<DbReference> existingDbRefs = new HashSet(); if (expDesc.getBibref() != null && expDesc.getBibref().getXref() != null){ existingDbRefs.addAll(expDesc.getBibref().getXref().getAllDbReferences()); if (expDesc.getBibref() != null && expDesc.getBibref().getXref() != null){ existingDbRefs.addAll(expDesc.getBibref().getXref().getAllDbReferences());
protected RepoEntry entryToRepoEntry(Entry entry) { RepoEntry repoEntry = new RepoEntry(); normalizeEntry(entry); String name = entry.getExperiments().iterator().next() .getBibref().getXref().getPrimaryRef().getId(); repoEntry.setPmid(name); repoEntry.setReleaseDate(PsiExchange.getReleaseDate(entry)); return repoEntry; } }