@Override public boolean readAttribute(String attributeName, String prefix, String value) { boolean isAttributeRead = super.readAttribute(attributeName, prefix, value); if (!isAttributeRead) { isAttributeRead = true; if (attributeName.equals(MultiConstants.compartment)) { setCompartment(value); } else { isAttributeRead = false; } } return isAttributeRead; }
@Override public boolean readAttribute(String attributeName, String prefix, String value) { boolean isAttributeRead = super.readAttribute(attributeName, prefix, value); if (!isAttributeRead) { isAttributeRead = true; if (attributeName.equals(MultiConstants.numericValue)) { setNumericValue(value); } else { isAttributeRead = false; } } return isAttributeRead; } }
@Override public boolean readAttribute(String attributeName, String prefix, String value) { boolean isAttributeRead = super.readAttribute(attributeName, prefix, value); if (!isAttributeRead) { isAttributeRead = true; if (attributeName.equals(MultiConstants.occur)) { setOccur(StringTools.parseSBMLInt(value)); } else { isAttributeRead = false; } } return isAttributeRead; } }
@Override public boolean readAttribute(String attributeName, String prefix, String value) { boolean isAttributeRead = super.readAttribute(attributeName, prefix, value); if (!isAttributeRead) { if (attributeName.equals(GroupsConstants.idRef)) { setIdRef(value); return true; } if (attributeName.equals(GroupsConstants.metaIdRef)) { setMetaIdRef(value); return true; } } return isAttributeRead; }
@Override public boolean readAttribute(String attributeName, String prefix, String value) { boolean isAttributeRead = super.readAttribute(attributeName, prefix, value); if (!isAttributeRead) { isAttributeRead = true; if (attributeName.equals(GroupsConstants.identicalAttribute)) { setIdenticalAttribute(value); } else if (attributeName.equals(GroupsConstants.distinctAttribute)) { setDistinctAttribute(value); } else { isAttributeRead = false; } } return isAttributeRead; }
@Override public boolean readAttribute(String attributeName, String prefix, String value) { boolean isAttributeRead = super.readAttribute(attributeName, prefix, value); if (!isAttributeRead) { isAttributeRead = true; if (attributeName.equals(MultiConstants.component)) { setComponent(value); } else if (attributeName.equals(MultiConstants.identifyingParent)) { setIndentifyingParent(value); } else { isAttributeRead = false; } } return isAttributeRead; }
@Override public boolean readAttribute(String attributeName, String prefix, String value) { boolean isAttributeRead = super.readAttribute(attributeName, prefix, value); if (!isAttributeRead) { if (attributeName.equals(MultiConstants.bindingSite1)) { setBindingSite1(value); isAttributeRead = true; } else if (attributeName.equals(MultiConstants.bindingSite2)) { setBindingSite2(value); isAttributeRead = true; } } return isAttributeRead; }
@Override public boolean readAttribute(String attributeName, String prefix, String value) { boolean isAttributeRead = super.readAttribute(attributeName, prefix, value); if (!isAttributeRead) { isAttributeRead = true; if (attributeName.equals(MultiConstants.speciesType)) { setSpeciesType(value); } else if (attributeName.equals(MultiConstants.compartmentReference)) { setCompartmentReference(value); } else { isAttributeRead = false; } } return isAttributeRead; } }
@Override public boolean readAttribute(String attributeName, String prefix, String value) { boolean isAttributeRead = super.readAttribute(attributeName, prefix, value); if (!isAttributeRead) { isAttributeRead = true; if (attributeName.equals(MultiConstants.productSpeciesFeature)) { setProductSpeciesFeature(value); } else if (attributeName.equals(MultiConstants.reactantSpeciesFeature)) { setReactantSpeciesFeature(value); } else { isAttributeRead = false; } } return isAttributeRead; }
@Override public boolean readAttribute(String attributeName, String prefix, String value) { boolean isAttributeRead = super.readAttribute(attributeName, prefix, value); if (!isAttributeRead) { isAttributeRead = true; if (attributeName.equals(ReqConstants.changedBy)) { setChangedBy(value); } else if (attributeName.equals(ReqConstants.viableWithoutChange)) { setViableWithoutChange(Boolean.valueOf(value)); } else { isAttributeRead = false; } } return isAttributeRead; }
@Override public boolean readAttribute(String attributeName, String prefix, String value) { boolean isAttributeRead = super.readAttribute(attributeName, prefix, value); if (!isAttributeRead) { isAttributeRead = true; if (attributeName.equals(ArraysConstants.arrayDimension)) { setArrayDimension(StringTools.parseSBMLInt(value)); } else if (attributeName.equals(ArraysConstants.size)) { setSize(value); } else { isAttributeRead = false; } } return isAttributeRead; }
@Override public boolean readAttribute(String attributeName, String prefix, String value) { boolean isAttributeRead = super.readAttribute(attributeName, prefix, value); if (!isAttributeRead) { isAttributeRead = true; if (attributeName.equals(CompConstants.modelRef)) { setModelRef(value); } else if (attributeName.equals(CompConstants.timeConversionFactor)) { setTimeConversionFactor(value); } else if (attributeName.equals(CompConstants.extentConversionFactor)) { setExtentConversionFactor(value); } else { isAttributeRead = false; } } return isAttributeRead; }
@Override public boolean readAttribute(String attributeName, String prefix, String value) { boolean isAttributeRead = super.readAttribute(attributeName, prefix, value); if (!isAttributeRead) { isAttributeRead = true; if (attributeName.equals(CompConstants.source)) { setSource(value); } else if (attributeName.equals(CompConstants.modelRef)) { setModelRef(value); } else if (attributeName.equals(CompConstants.md5)) { setMd5(value); } else { isAttributeRead = false; } } return isAttributeRead; }
@Override public boolean readAttribute(String attributeName, String prefix, String value) { boolean isAttributeRead = super.readAttribute(attributeName, prefix, value); if (!isAttributeRead && attributeName.equals("kind")) { try { setKind(Kind.valueOf(value)); isAttributeRead = true; } catch (Exception e) { throw new SBMLException("Could not recognized the value '" + value + "' for the attribute 'kind' on the 'group' element."); } } return isAttributeRead; }
@Override public boolean readAttribute(String attributeName, String prefix, String value) { boolean isAttributeRead = super.readAttribute(attributeName, prefix, value); if (!isAttributeRead) { isAttributeRead = true; if (attributeName.equals(MultiConstants.occur)) { setOccur(StringTools.parseSBMLInt(value)); } else if (attributeName.equals(MultiConstants.speciesFeatureType)) { setSpeciesFeatureType(value); } else if (attributeName.equals(MultiConstants.component)) { setComponent(value); } else { isAttributeRead = false; } } return isAttributeRead; } }
@Override public boolean readAttribute(String attributeName, String prefix, String value) { boolean isAttributeRead = super.readAttribute(attributeName, prefix, value); if (!isAttributeRead) { isAttributeRead = true; if (attributeName.equals(TreeNodeChangeEvent.reversible)) { setReversible(StringTools.parseSBMLBoolean(value)); } else if (attributeName.equals(TreeNodeChangeEvent.fast)) { setFast(StringTools.parseSBMLBoolean(value)); } else if (attributeName.equals(TreeNodeChangeEvent.compartment)) { this.setCompartment(value); } else { isAttributeRead = false; } } return isAttributeRead; }
@Override public boolean readAttribute(String attributeName, String prefix, String value) { boolean isAttributeRead = super.readAttribute(attributeName, prefix, value); if (!isAttributeRead) { if (attributeName.equals("substanceUnits")) { setSubstanceUnits(value); return true; } else if (attributeName.equals("timeUnits")) { setTimeUnits(value); return true; } else if (attributeName.equals("volumeUnits")) { setVolumeUnits(value); return true; } else if (attributeName.equals("areaUnits")) { setAreaUnits(value); return true; } else if (attributeName.equals("lengthUnits")) { setLengthUnits(value); return true; } else if (attributeName.equals("extentUnits")) { setExtentUnits(value); return true; } else if (attributeName.equals("conversionFactor")) { setConversionFactor(value); return true; } } return isAttributeRead; }
@Override public boolean readAttribute(String attributeName, String prefix, String value) { boolean isAttributeRead = super.readAttribute(attributeName, prefix, value); if (!isAttributeRead) { isAttributeRead = true; if (attributeName.equals(QualConstants.qualitativeSpecies)) { setQualitativeSpecies(value); } else if (attributeName.equals(QualConstants.outputLevel)) { try { setOutputLevel(StringTools.parseSBMLInt(value)); } catch (IllegalArgumentException e) { AbstractReaderWriter.processInvalidAttribute(attributeName, null, value, prefix, this); } } else if (attributeName.equals(QualConstants.transitionEffect)) { try { setTransitionEffect(OutputTransitionEffect.valueOf(value)); } catch (IllegalArgumentException e) { AbstractReaderWriter.processInvalidAttribute(attributeName, null, value, prefix, this); } } else { isAttributeRead = false; } } return isAttributeRead; }
@Override public boolean readAttribute(String attributeName, String prefix, String value) { boolean isAttributeRead = super.readAttribute(attributeName, prefix, value); if (!isAttributeRead) { isAttributeRead = true; if (attributeName.equals("species") && (((getLevel() == 1) && (getVersion() == 2)) || (getLevel() > 1))) { setSpecies(value); } else if (attributeName.equals("specie") && (getLevel() == 1) && (getVersion() == 1)) { setSpecies(value); } else { isAttributeRead = false; } } return isAttributeRead; }
@Override public boolean readAttribute(String attributeName, String prefix, String value) { boolean isAttributeRead = super.readAttribute(attributeName, prefix, value);