- <init>
- read
Takes an object which subclasses IChemObject, e.g. Molecule, and will read this
(from file, database
- close
- dataHeader
Obtain the field name from a potential SD data header. If the header does not
contain a field name,
- isPseudoElement
Is the atom symbol a non-periodic element (i.e. pseudo). Valid pseudo atoms are
'R#', 'A', 'Q', '*',
- readAtomFast
- readBondFast
Read a bond from a line in the MDL bond block. The bond block is formatted as
follows, 111222tttsssx
- readMDLCoordinate
Read a coordinate from an MDL input. The MDL V2000 input coordinate has 10
characters, 4 significant
- readNonStructuralData
Read non-structural data from input and store as properties the provided
'container'. Non-structural
- readPropertiesFast
Reads the property block from the input setting the values in the container.
- setReader
- addChemObjectIOListener