- Common ways to obtain PDBFileReader
private void myMethod () {}
private void checkFile(String repre) throws IOException, StructureException { StructureName name = new StructureName(repre); PDBFileReader reader = new PDBFileReader(); reader.setFetchBehavior(FetchBehavior.FETCH_REMEDIATED); reader.setPath(cache.getPath()); reader.setFileParsingParameters(cache.getFileParsingParams()); reader.prefetchStructure(name.getPdbId()); }