public String getPlateName(int plateIndex) { // Parents: {u'OME': None} // Name is not a reference return root.getPlate(plateIndex).getName(); }
public int getPlateAcquisitionCount(int plateIndex) { // Parents: {u'Plate': {u'OME': None}} // PlateAcquisition is not a reference return root.getPlate(plateIndex).sizeOfPlateAcquisitionList(); }
public String getPlateDescription(int plateIndex) { // Parents: {u'OME': None} // Description is not a reference return root.getPlate(plateIndex).getDescription(); }
public NamingConvention getPlateRowNamingConvention(int plateIndex) { // Parents: {u'OME': None} // RowNamingConvention is not a reference return root.getPlate(plateIndex).getRowNamingConvention(); }
public String getPlateStatus(int plateIndex) { // Parents: {u'OME': None} // Status is not a reference return root.getPlate(plateIndex).getStatus(); }
public String getWellID(int plateIndex, int wellIndex) { // Parents: {u'Plate': {u'OME': None}} // ID is not a reference return root.getPlate(plateIndex).getWell(wellIndex).getID(); }
public String getWellType(int plateIndex, int wellIndex) { // Parents: {u'Plate': {u'OME': None}} // Type is not a reference return root.getPlate(plateIndex).getWell(wellIndex).getType(); }
public int getWellAnnotationRefCount(int plateIndex, int wellIndex) { // Parents: {u'LightSource': {u'Instrument': {u'OME': None}}, u'Instrument': {u'OME': None}, u'Objective': {u'Instrument': {u'OME': None}}, u'Folder': {u'OME': None}, u'Detector': {u'Instrument': {u'OME': None}}, u'Channel': {u'Pixels': {u'Image': {u'OME': None}}}, u'Plate': {u'OME': None}, u'ExperimenterGroup': {u'OME': None}, u'Screen': {u'OME': None}, u'Reagent': {u'Screen': {u'OME': None}}, u'Plane': {u'Pixels': {u'Image': {u'OME': None}}}, u'Experimenter': {u'OME': None}, u'Annotation': None, u'Dichroic': {u'Instrument': {u'OME': None}}, u'Well': {u'Plate': {u'OME': None}}, u'Filter': {u'Instrument': {u'OME': None}}, u'PlateAcquisition': {u'Plate': {u'OME': None}}, u'ROI': {u'OME': None}, u'Project': {u'OME': None}, u'LightPath': {u'Channel': {u'Pixels': {u'Image': {u'OME': None}}}}, u'Image': {u'OME': None}, u'Dataset': {u'OME': None}, u'Shape': {u'Union': {u'ROI': {u'OME': None}}}} // AnnotationRef is a reference return root.getPlate(plateIndex).getWell(wellIndex).sizeOfLinkedAnnotationList(); }
public String getPlateAcquisitionDescription(int plateIndex, int plateAcquisitionIndex) { // Parents: {u'Plate': {u'OME': None}} // Description is not a reference return root.getPlate(plateIndex).getPlateAcquisition(plateAcquisitionIndex).getDescription(); }
public String getWellExternalDescription(int plateIndex, int wellIndex) { // Parents: {u'Plate': {u'OME': None}} // ExternalDescription is not a reference return root.getPlate(plateIndex).getWell(wellIndex).getExternalDescription(); }
public String getWellID(int plateIndex, int wellIndex) { // Parents: {u'Plate': {u'OME': None}} // ID is not a reference return root.getPlate(plateIndex).getWell(wellIndex).getID(); }
public Timestamp getPlateAcquisitionEndTime(int plateIndex, int plateAcquisitionIndex) { // Parents: {u'Plate': {u'OME': None}} // EndTime is not a reference return root.getPlate(plateIndex).getPlateAcquisition(plateAcquisitionIndex).getEndTime(); }
public String getWellReagentRef(int plateIndex, int wellIndex) { // Parents: {u'Plate': {u'OME': None}} // ReagentRef is reference and occurs only once return root.getPlate(plateIndex).getWell(wellIndex).getLinkedReagent().getID(); }
public String getPlateAcquisitionWellSampleRef(int plateIndex, int plateAcquisitionIndex, int wellSampleRefIndex) { // Parents: {u'Plate': {u'OME': None}} // WellSampleRef is reference and occurs more than once return root.getPlate(plateIndex).getPlateAcquisition(plateAcquisitionIndex).getLinkedWellSample(wellSampleRefIndex).getID(); }
public String getWellAnnotationRef(int plateIndex, int wellIndex, int annotationRefIndex) { // Parents: {u'Plate': {u'OME': None}} // AnnotationRef is reference and occurs more than once return root.getPlate(plateIndex).getWell(wellIndex).getLinkedAnnotation(annotationRefIndex).getID(); }
public Length getWellSamplePositionY(int plateIndex, int wellIndex, int wellSampleIndex) { // Parents: {u'Well': {u'Plate': {u'OME': None}}} // PositionY is not a reference return root.getPlate(plateIndex).getWell(wellIndex).getWellSample(wellSampleIndex).getPositionY(); }
public String getWellSampleID(int plateIndex, int wellIndex, int wellSampleIndex) { // Parents: {u'Well': {u'Plate': {u'OME': None}}} // ID is not a reference return root.getPlate(plateIndex).getWell(wellIndex).getWellSample(wellSampleIndex).getID(); }
public void setPlateAnnotationRef(String annotation, int plateIndex, int annotationRefIndex) { // Parents: {u'OME': None} // AnnotationRef is reference and occurs more than once AnnotationRef annotationLinks_reference = new AnnotationRef(); annotationLinks_reference.setID(annotation); model.addReference( root.getPlate(plateIndex), annotationLinks_reference); }
public void setPlateAcquisitionWellSampleRef(String wellSample, int plateIndex, int plateAcquisitionIndex, int wellSampleRefIndex) { // Parents: {u'Plate': {u'OME': None}} // WellSampleRef is reference and occurs more than once WellSampleRef wellSamples_reference = new WellSampleRef(); wellSamples_reference.setID(wellSample); model.addReference( root.getPlate(plateIndex).getPlateAcquisition(plateAcquisitionIndex), wellSamples_reference); }
public void setWellAnnotationRef(String annotation, int plateIndex, int wellIndex, int annotationRefIndex) { // Parents: {u'Plate': {u'OME': None}} // AnnotationRef is reference and occurs more than once AnnotationRef annotationLinks_reference = new AnnotationRef(); annotationLinks_reference.setID(annotation); model.addReference( root.getPlate(plateIndex).getWell(wellIndex), annotationLinks_reference); }