/** * Performs a Burrows Wheeler Transform on the input array. * @return the index of the first character of the input array within the output array */ public int bwt() { final int[] SA = this.SA; final byte[] T = this.T; final int n = this.n; final int[] bucketA = new int[BUCKET_A_SIZE]; final int[] bucketB = new int[BUCKET_B_SIZE]; if (n == 0) { return 0; } if (n == 1) { SA[0] = T[0]; return 0; } int m = sortTypeBstar(bucketA, bucketB); if (0 < m) { return constructBWT(bucketA, bucketB); } return 0; } }
/** * Performs a Burrows Wheeler Transform on the input array. * @return the index of the first character of the input array within the output array */ public int bwt() { final int[] SA = this.SA; final byte[] T = this.T; final int n = this.n; final int[] bucketA = new int[BUCKET_A_SIZE]; final int[] bucketB = new int[BUCKET_B_SIZE]; if (n == 0) { return 0; } if (n == 1) { SA[0] = T[0]; return 0; } int m = sortTypeBstar(bucketA, bucketB); if (0 < m) { return constructBWT(bucketA, bucketB); } return 0; } }
/** * Performs a Burrows Wheeler Transform on the input array. * @return the index of the first character of the input array within the output array */ public int bwt() { final int[] SA = this.SA; final byte[] T = this.T; final int n = this.n; final int[] bucketA = new int[BUCKET_A_SIZE]; final int[] bucketB = new int[BUCKET_B_SIZE]; if (n == 0) { return 0; } if (n == 1) { SA[0] = T[0]; return 0; } int m = sortTypeBstar(bucketA, bucketB); if (0 < m) { return constructBWT(bucketA, bucketB); } return 0; } }
/** * Performs a Burrows Wheeler Transform on the input array. * @return the index of the first character of the input array within the output array */ public int bwt() { final int[] SA = this.SA; final byte[] T = this.T; final int n = this.n; final int[] bucketA = new int[BUCKET_A_SIZE]; final int[] bucketB = new int[BUCKET_B_SIZE]; if (n == 0) { return 0; } if (n == 1) { SA[0] = T[0]; return 0; } int m = sortTypeBstar(bucketA, bucketB); if (0 < m) { return constructBWT(bucketA, bucketB); } return 0; } }
/** * Performs a Burrows Wheeler Transform on the input array. * @return the index of the first character of the input array within the output array */ public int bwt() { final int[] SA = this.SA; final byte[] T = this.T; final int n = this.n; final int[] bucketA = new int[BUCKET_A_SIZE]; final int[] bucketB = new int[BUCKET_B_SIZE]; if (n == 0) { return 0; } if (n == 1) { SA[0] = T[0]; return 0; } int m = sortTypeBstar(bucketA, bucketB); if (0 < m) { return constructBWT(bucketA, bucketB); } return 0; } }
/** * Performs a Burrows Wheeler Transform on the input array. * @return the index of the first character of the input array within the output array */ public int bwt() { final int[] SA = this.SA; final byte[] T = this.T; final int n = this.n; final int[] bucketA = new int[BUCKET_A_SIZE]; final int[] bucketB = new int[BUCKET_B_SIZE]; if (n == 0) { return 0; } if (n == 1) { SA[0] = T[0]; return 0; } int m = sortTypeBstar(bucketA, bucketB); if (0 < m) { return constructBWT(bucketA, bucketB); } return 0; } }
/** * Performs a Burrows Wheeler Transform on the input array. * @return the index of the first character of the input array within the output array */ public int bwt() { final int[] SA = this.SA; final byte[] T = this.T; final int n = this.n; final int[] bucketA = new int[BUCKET_A_SIZE]; final int[] bucketB = new int[BUCKET_B_SIZE]; if (n == 0) { return 0; } if (n == 1) { SA[0] = T[0]; return 0; } int m = sortTypeBstar(bucketA, bucketB); if (0 < m) { return constructBWT(bucketA, bucketB); } return 0; } }