public static char complement(char character) { byte base = htsjdk.samtools.util.StringUtil.charToByte(character); base = SequenceUtil.complement(base); return htsjdk.samtools.util.StringUtil.byteToChar(base); }
while (sequenceLength > 0 && Character.isWhitespace(StringUtil.byteToChar(bases[sequenceLength - 1]))) { --sequenceLength;
while (sequenceLength > 0 && Character.isWhitespace(StringUtil.byteToChar(bases[sequenceLength - 1]))) { --sequenceLength;
while (sequenceLength > 0 && Character.isWhitespace(StringUtil.byteToChar(bases[sequenceLength - 1]))) { --sequenceLength;