/** * After all the alignment records have been processed, finish is called. * Writes any final information and closes the output file. */ public void finish() { // process any remaining references advanceToReference(numReferences); outputWriter.writeNoCoordinateRecordCount(indexBuilder.getNoCoordinateRecordCount()); outputWriter.close(); }
/** * After all the alignment records have been processed, finish is called. * Writes any final information and closes the output file. */ public void finish() { // process any remaining references advanceToReference(numReferences); outputWriter.writeNoCoordinateRecordCount(indexBuilder.getNoCoordinateRecordCount()); outputWriter.close(); }
/** * After all the alignment records have been processed, finish is called. * Writes any final information and closes the output file. */ public void finish() { // process any remaining references advanceToReference(numReferences); outputWriter.writeNoCoordinateRecordCount(indexBuilder.getNoCoordinateRecordCount()); outputWriter.close(); }