case X : final int length = e.getLength(); alignmentBlocks.add(new AlignmentBlock(readBase, refBase, length)); readBase += length; refBase += length;
case X: final int length = e.getLength(); alignmentBlocks.add(new AlignmentBlock(readBase, refBase, length)); readBase += length; refBase += length;
case X: final int length = e.getLength(); alignmentBlocks.add(new AlignmentBlock(readBase, refBase, length)); readBase += length; refBase += length;
case X: final int length = e.getLength(); alignmentBlocks.add(new AlignmentBlock(readBase, refBase, length)); readBase += length; refBase += length;