private static ReferenceDictionary toReferenceDictionary(JannovarProto.ReferenceDictionary protoRefDict) { ReferenceDictionaryBuilder referenceDictionaryBuilder = new ReferenceDictionaryBuilder(); protoRefDict.getContigNameToIdMap().forEach(referenceDictionaryBuilder::putContigID); protoRefDict.getContigIdToNameMap().forEach(referenceDictionaryBuilder::putContigName); protoRefDict.getContigIdToLengthMap().forEach(referenceDictionaryBuilder::putContigLength); return referenceDictionaryBuilder.build(); }
ReferenceDictionaryBuilder builder = new ReferenceDictionaryBuilder();
public static ReferenceDictionary build() { ReferenceDictionaryBuilder builder = new ReferenceDictionaryBuilder();