public void actionPerformed(ActionEvent e) { final CyNetworkView currentNetworkView = Cytoscape.getCurrentNetworkView(); currentNetworkView.hideGraphObject(nodeView); currentNetworkView.updateView(); } }
public void run() { testObjects(); Cytoscape.getCurrentNetworkView().updateView(); } }
/** * DOCUMENT ME! * * @param e DOCUMENT ME! */ public void actionPerformed(ActionEvent e) { selectFromFile(); Cytoscape.getCurrentNetworkView().updateView(); }
public void actionPerformed(ActionEvent e) { final CyNetworkView currentNetworkView = Cytoscape.getCurrentNetworkView(); currentNetworkView.hideGraphObject(nodeView); currentNetworkView.updateView(); } }
/** * DOCUMENT ME! * * @param e DOCUMENT ME! */ public void actionPerformed(ActionEvent e) { final CyNetwork currentNetwork = Cytoscape.getCurrentNetwork(); final List<Node> selectedNodes = new ArrayList<Node>(currentNetwork.getSelectedNodes()); for (final Iterator it = selectedNodes.iterator(); it.hasNext();) { currentNetwork.setSelectedNodeState(currentNetwork.neighborsList((Node) it.next()), true); } Cytoscape.getCurrentNetworkView().updateView(); } // actionPerformed
/** * DOCUMENT ME! * * @param e DOCUMENT ME! */ public void actionPerformed(ActionEvent e) { ((DingNetworkView) Cytoscape.getCurrentNetworkView()).fitSelected(); Cytoscape.getCurrentNetworkView().updateView(); } }
public void run() { cyNetwork.setSelectedNodeState(toBeSelected, true); cyNetwork.setSelectedNodeState(toBeUnselected, false); Cytoscape.getCurrentNetworkView().updateView(); } });
public void run() { cyNetwork.setSelectedEdgeState(toBeSelected, true); cyNetwork.setSelectedEdgeState(toBeUnselected, false); Cytoscape.getCurrentNetworkView().updateView(); } });
/** * DOCUMENT ME! * * @param e DOCUMENT ME! */ public void actionPerformed(ActionEvent e) { final CyNetwork currentNetwork = Cytoscape.getCurrentNetwork(); Set<CyEdge> edgeSet = currentNetwork.getSelectedEdges(); final List<Edge> selectedEdges = new ArrayList<Edge>(edgeSet); final Set<Node>nodesToSelect = new HashSet<Node>(); for (Edge edge: selectedEdges) { nodesToSelect.add(edge.getSource()); nodesToSelect.add(edge.getTarget()); } currentNetwork.setSelectedNodeState(nodesToSelect, true); Cytoscape.getCurrentNetworkView().updateView(); } // actionPerformed
/** * DOCUMENT ME! * * @param e DOCUMENT ME! */ public void actionPerformed(ActionEvent e) { final CyNetwork cyNetwork = Cytoscape.getCurrentNetwork(); final List<Edge> selectedEdges = new ArrayList<Edge>(cyNetwork.getSelectedEdges()); cyNetwork.selectAllEdges(); cyNetwork.setSelectedEdgeState(selectedEdges, false); Cytoscape.getCurrentNetworkView().updateView(); }
/** * DOCUMENT ME! * * @param e DOCUMENT ME! */ public void actionPerformed(ActionEvent e) { final CyNetwork cyNetwork = Cytoscape.getCurrentNetwork(); final List<Node> selectedNodes = new ArrayList<Node>(cyNetwork.getSelectedNodes()); cyNetwork.selectAllNodes(); cyNetwork.setSelectedNodeState(selectedNodes, false); Cytoscape.getCurrentNetworkView().updateView(); }
/** * DOCUMENT ME! * * @param e DOCUMENT ME! */ public void actionPerformed(ActionEvent e) { Cytoscape.getCurrentNetwork().selectAllNodes(); if (Cytoscape.getCurrentNetworkView() != null) { Cytoscape.getCurrentNetworkView().updateView(); } }
/** * DOCUMENT ME! * * @param e DOCUMENT ME! */ public void actionPerformed(ActionEvent e) { // GinyUtils.deselectAllEdges( Cytoscape.getCurrentNetworkView() ); Cytoscape.getCurrentNetwork().unselectAllEdges(); if (Cytoscape.getCurrentNetworkView() != null) { Cytoscape.getCurrentNetworkView().updateView(); } } // action performed
/** * DOCUMENT ME! * * @param e DOCUMENT ME! */ public void actionPerformed(ActionEvent e) { // GinyUtils.deselectAllNodes( Cytoscape.getCurrentNetworkView() ); Cytoscape.getCurrentNetwork().unselectAllNodes(); if (Cytoscape.getCurrentNetworkView() != null) { Cytoscape.getCurrentNetworkView().updateView(); } }
/** * DOCUMENT ME! * * @param e DOCUMENT ME! */ public void actionPerformed(ActionEvent e) { // GinyUtils.selectAllEdges( Cytoscape.getCurrentNetworkView() ); Cytoscape.getCurrentNetwork().selectAllEdges(); if (Cytoscape.getCurrentNetworkView() != null) { Cytoscape.getCurrentNetworkView().updateView(); } } // action performed
/** * DOCUMENT ME! * * @param e DOCUMENT ME! */ public void actionPerformed(ActionEvent e) { CyNetworkView view = Cytoscape.getCurrentNetworkView(); final int[] selectedEdges = view.getSelectedEdgeIndices(); if (selectedEdges != null) { for (int i = 0; i < selectedEdges.length; i++) { EdgeView ev = view.getEdgeView(selectedEdges[i]); ev.setLineType(EdgeView.CURVED_LINES); } view.updateView(); } }
public void undo() { super.undo(); for (final NodeView nodeView : hiddenNodeViews) { networkView.showGraphObject(nodeView); nodeView.setSelected(true); GinyUtils.showEdges(networkView, nodeView); } networkView.updateView(); hideSelectedNodesAction.setEnabled(true); } }
/** * DOCUMENT ME! * * @param e DOCUMENT ME! */ public void actionPerformed(ActionEvent e) { // GinyUtils.deselectAllNodes( Cytoscape.getCurrentNetworkView() ); // GinyUtils.deselectAllEdges( Cytoscape.getCurrentNetworkView() ); Cytoscape.getCurrentNetwork().unselectAllNodes(); Cytoscape.getCurrentNetwork().unselectAllEdges(); Cytoscape.getCurrentNetworkView().updateView(); }
/** * DOCUMENT ME! */ public void run() { Cytoscape.getCurrentNetwork().unselectAllNodes(); Cytoscape.getCurrentNetwork().unselectAllEdges(); testObjects(theFilter); Cytoscape.getCurrentNetworkView().updateView(); }
/** * DOCUMENT ME! * * @param e DOCUMENT ME! */ public void actionPerformed(ActionEvent e) { // GinyUtils.selectAllNodes( Cytoscape.getCurrentNetworkView() ); // GinyUtils.selectAllEdges( Cytoscape.getCurrentNetworkView() ); Cytoscape.getCurrentNetwork().selectAllNodes(); Cytoscape.getCurrentNetwork().selectAllEdges(); if (Cytoscape.getCurrentNetworkView() != null) { Cytoscape.getCurrentNetworkView().updateView(); } } // action performed