/** {@inheritDoc} */ @Override public FijiTableWriter openTableWriter() { return mTable.openTableWriter(); }
@Override public FijiTableWriter run(final FijiTable fijiTable) throws Exception { return fijiTable.openTableWriter(); } };
/** {@inheritDoc} */ @Override public final FijiTableWriter openResource() throws Exception { if (null != mTableURI) { final WithFijiTable<FijiTableWriter> wkt = new WithFijiTable<FijiTableWriter>(mTableURI) { @Override public FijiTableWriter run(final FijiTable fijiTable) throws Exception { return fijiTable.openTableWriter(); } }; return wkt.eval(); } else { return mTable.openTableWriter(); } } }
/** {@inheritDoc} */ @Override protected void setup(Context hadoopContext) throws IOException, InterruptedException { super.setup(hadoopContext); final Configuration conf = hadoopContext.getConfiguration(); FijiURI tableURI; try { tableURI = FijiURI.newBuilder(conf.get(FijiConfKeys.OUTPUT_FIJI_TABLE_URI)).build(); } catch (FijiURIException kue) { throw new IOException(kue); } mFiji = Fiji.Factory.open(tableURI, conf); mTable = mFiji.openTable(TABLE_NAME); mWriter = mTable.openTableWriter(); }
/** {@inheritDoc} */ @Override protected void setup(Context hadoopContext) throws IOException, InterruptedException { super.setup(hadoopContext); final Configuration conf = hadoopContext.getConfiguration(); FijiURI tableURI; try { tableURI = FijiURI.newBuilder(conf.get(FijiConfKeys.OUTPUT_FIJI_TABLE_URI)).build(); } catch (FijiURIException kue) { throw new IOException(kue); } mFiji = Fiji.Factory.open(tableURI, conf); mTable = mFiji.openTable(TABLE_NAME); mTableWriter = mTable.openTableWriter(); }
/** {@inheritDoc} */ @Override protected void setup(Context hadoopContext) throws IOException, InterruptedException { super.setup(hadoopContext); final Configuration conf = hadoopContext.getConfiguration(); FijiURI tableURI; try { tableURI = FijiURI.newBuilder(conf.get(FijiConfKeys.OUTPUT_FIJI_TABLE_URI)).build(); } catch (FijiURIException kue) { throw new IOException(kue); } mFiji = Fiji.Factory.open(tableURI, hadoopContext.getConfiguration()); mTable = mFiji.openTable(tableURI.getTable()); mWriter = mTable.openTableWriter(); }
/** * Constructor. * * @param conf The job configuration. * @throws java.io.IOException If the input split cannot be opened. */ public FijiTableRecordWriter(Configuration conf) throws IOException { String fijiURIString = conf.get(FijiTableOutputFormat.CONF_FIJI_TABLE_URI); FijiURI fijiURI = FijiURI.newBuilder(fijiURIString).build(); mFiji = Fiji.Factory.open(fijiURI); mFijiTable = mFiji.openTable(fijiURI.getTable()); mFijiTableWriter = mFijiTable.openTableWriter(); }
final FijiTableWriter tableWriter = mTable.openTableWriter(); try { for (int iuser = 0; iuser < mNumUsers; iuser++) {
final FijiTableWriter writer = fijiTable.openTableWriter();
writer = table.openTableWriter();
ToolUtils.createEntityIdFromUserInputs(mEntityId, layout); final FijiTableWriter writer = mTable.openTableWriter(); try { if (cellSchema.getType() == SchemaType.COUNTER) {
throws Exception { final FijiTableWriter writer = table.openTableWriter(); try { if (columns.isEmpty()) {
writer = table.openTableWriter();
final FijiTable table = fiji.openTable(mCellURI.getTable()); try { final FijiTableWriter writer = table.openTableWriter(); try { for (FijiColumnName column : mCellURI.getColumns()) {
writer = table.openTableWriter();