@Test
public void trans() {
IAtomContainer m = new AtomContainer(5, 4, 0, 0);
m.addAtom(atom("C", 3, -0.74d, 5.00d));
m.addAtom(atom("C", 1, -1.49d, 3.70d));
m.addAtom(atom("C", 1, -0.74d, 2.40d));
m.addAtom(atom("C", 2, 0.76d, 2.40d));
m.addAtom(atom("C", 3, 1.51d, 1.10d));
m.addBond(0, 1, IBond.Order.SINGLE);
m.addBond(1, 2, IBond.Order.DOUBLE);
m.addBond(2, 3, IBond.Order.SINGLE);
m.addBond(3, 4, IBond.Order.SINGLE);
m.addStereoElement(new DoubleBondStereochemistry(m.getBond(1), new IBond[]{m.getBond(0), m.getBond(2)},
OPPOSITE));
CorrectGeometricConfiguration.correct(m);
assertPoint(m.getAtom(0), -0.74, 5.0, 0.1);
assertPoint(m.getAtom(1), -1.49, 3.7, 0.1);
assertPoint(m.getAtom(2), -0.74d, 2.40d, 0.1);
assertPoint(m.getAtom(3), -1.49d, 1.10d, 0.1);
assertPoint(m.getAtom(4), -0.74d, -0.20d, 0.1);
}