@Override Digester createDigester() { return new Digester(new Crc32Hasher(new IntegerSumCombine()), SERIES.SCORES, name()); } },
@Override Digester createDigester() { return new Digester(new Crc32Hasher(new IntegerSumCombine()), SERIES.BASES, name()); } },
void add(final byte[] data) { resetAndUpdate(data); final T updateValue = getValue(); if (value == null) value = updateValue; else value = combine.combine(value, updateValue); } }
@Override Digester createDigester() { try { return new Digester(new MessageDigestHasher( MessageDigest.getInstance("SHA-1"), new ByteSumCombine(), null), SERIES.SCORES, name()); } catch (final NoSuchAlgorithmException e) { throw new RuntimeException(e); } } };
@Override Digester createDigester() { try { return new Digester(new MessageDigestHasher( MessageDigest.getInstance("SHA-512"), new ByteSumCombine(), null), SERIES.BASES, name()); } catch (final NoSuchAlgorithmException e) { throw new RuntimeException(e); } } },
@Override Digester createDigester() { try { return new Digester(new MessageDigestHasher( MessageDigest.getInstance("SHA-512"), new ByteSumCombine(), null), SERIES.SCORES, name()); } catch (final NoSuchAlgorithmException e) { throw new RuntimeException(e); } } },
@Override Digester createDigester() { try { return new Digester(new MessageDigestHasher( MessageDigest.getInstance("SHA-1"), new ByteSumCombine(), null), SERIES.BASES, name()); } catch (final NoSuchAlgorithmException e) { throw new RuntimeException(e); } } },
public void addSAMRecords(final Iterable<SAMRecord> records) { for (final SAMRecord record : records) add(record); }
void add(final SAMRecord record) { for (final Digester digester : digesters) digester.add(record); }
@Override Digester createDigester() { return new Digester(new Crc32Hasher(new IntegerSumCombine()), SERIES.SCORES, name()); } },
@Override Digester createDigester() { return new Digester(new Crc32Hasher(new IntegerSumCombine()), SERIES.BASES, name()); } },
@Override Digester createDigester() { try { return new Digester(new MessageDigestHasher( MessageDigest.getInstance("SHA-1"), new ByteSumCombine(), null), SERIES.SCORES, name()); } catch (final NoSuchAlgorithmException e) { throw new RuntimeException(e); } } };
@Override Digester createDigester() { try { return new Digester(new MessageDigestHasher( MessageDigest.getInstance("SHA-512"), new ByteSumCombine(), null), SERIES.BASES, name()); } catch (final NoSuchAlgorithmException e) { throw new RuntimeException(e); } } },
@Override Digester createDigester() { try { return new Digester(new MessageDigestHasher( MessageDigest.getInstance("SHA-512"), new ByteSumCombine(), null), SERIES.SCORES, name()); } catch (final NoSuchAlgorithmException e) { throw new RuntimeException(e); } } },
@Override Digester createDigester() { try { return new Digester(new MessageDigestHasher( MessageDigest.getInstance("SHA-1"), new ByteSumCombine(), null), SERIES.BASES, name()); } catch (final NoSuchAlgorithmException e) { throw new RuntimeException(e); } } },
void add(final byte[] data) { resetAndUpdate(data); final T updateValue = getValue(); if (value == null) value = updateValue; else value = combine.combine(value, updateValue); } }