How to use
getPubmedPrimaryReferenceXref
method
in
uk.ac.ebi.intact.model.util.PublicationUtils

Best Java code snippets using uk.ac.ebi.intact.model.util.PublicationUtils.getPubmedPrimaryReferenceXref (Showing top 2 results out of 315)

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/**
 * Gets the pubmed ID for an Experiment - whitout hitting the database
 *
 * @param experiment the experiment to get the pubmed id from
 * @return the pubmed id
 */
public static String getPubmedId(Experiment experiment) {
  String pubmedId = null;
  Publication publication = experiment.getPublication();
  if (publication != null) {
    PublicationXref xref = PublicationUtils.getPubmedPrimaryReferenceXref(publication);
    if (xref != null){
      pubmedId = xref.getPrimaryId();
    }
  }
  if (pubmedId == null) {
    ExperimentXref xref = getPubmedPrimaryReferenceXref(experiment);
    if (xref != null) {
      pubmedId = xref.getPrimaryId();
    }
  }
  return pubmedId;
}

/**
 * Gets the pubmed ID for an Experiment - whitout hitting the database
 *
 * @param experiment the experiment to get the pubmed id from
 * @return the pubmed id
 */
public static String getPubmedId(Experiment experiment) {
  String pubmedId = null;
  Publication publication = experiment.getPublication();
  if (publication != null) {
    PublicationXref xref = PublicationUtils.getPubmedPrimaryReferenceXref(publication);
    if (xref != null){
      pubmedId = xref.getPrimaryId();
    }
  }
  if (pubmedId == null) {
    ExperimentXref xref = getPubmedPrimaryReferenceXref(experiment);
    if (xref != null) {
      pubmedId = xref.getPrimaryId();
    }
  }
  return pubmedId;
}

Popular methods of PublicationUtils

getLastEventOfType
Gets the last lifecycle event with the provided CvLifecycleEvent identifier for a publication.
isOnHold
nextUnassignedId

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How to use getPubmedPrimaryReferenceXrefmethodin uk.ac.ebi.intact.model.util.PublicationUtils

Best Java code snippets using uk.ac.ebi.intact.model.util.PublicationUtils.getPubmedPrimaryReferenceXref (Showing top 2 results out of 315)

How to use
getPubmedPrimaryReferenceXref
method
in
uk.ac.ebi.intact.model.util.PublicationUtils