uk.ac.ebi.intact.core.persister.IntactCore.ensureInitializedLifecycleEvents java code examples

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 ScheduledThreadPoolExecutor s =new ScheduledThreadPoolExecutor(corePoolSize)
ThreadFactory threadFactory;new ScheduledThreadPoolExecutor(corePoolSize, threadFactory)
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}

/**
 * Gets the last lifecycle event with the provided CvLifecycleEvent identifier for a publication.
 * @param publication the publication
 * @param cvLifecycleEventId the identifier of the CvLifecycleEvent cv
 * @return The last event with that identifier
 * @since 2.5.0
 */
public static LifecycleEvent getLastEventOfType(Publication publication, String cvLifecycleEventId) {
  LifecycleEvent lastEvent = null;
  List<LifecycleEvent> sorted = IntactCore.ensureInitializedLifecycleEvents(publication);
  Collections.sort(sorted, new Comparator<LifecycleEvent>() {
    @Override
    public int compare(LifecycleEvent o1, LifecycleEvent o2) {
      return o1.getWhen().compareTo(o2.getWhen());
    }
  });
  for (LifecycleEvent event : IntactCore.ensureInitializedLifecycleEvents(publication)) {
    if (cvLifecycleEventId.equals(event.getEvent().getIdentifier())) {
      lastEvent = event;
    }
  }
  return lastEvent;
}

/**
 * Gets the last lifecycle event with the provided CvLifecycleEvent identifier for a publication.
 * @param publication the publication
 * @param cvLifecycleEventId the identifier of the CvLifecycleEvent cv
 * @return The last event with that identifier
 * @since 2.5.0
 */
public static LifecycleEvent getLastEventOfType(Publication publication, String cvLifecycleEventId) {
  LifecycleEvent lastEvent = null;
  List<LifecycleEvent> sorted = IntactCore.ensureInitializedLifecycleEvents(publication);
  Collections.sort(sorted, new Comparator<LifecycleEvent>() {
    @Override
    public int compare(LifecycleEvent o1, LifecycleEvent o2) {
      return o1.getWhen().compareTo(o2.getWhen());
    }
  });
  for (LifecycleEvent event : IntactCore.ensureInitializedLifecycleEvents(publication)) {
    if (cvLifecycleEventId.equals(event.getEvent().getIdentifier())) {
      lastEvent = event;
    }
  }
  return lastEvent;
}

public Publication clonePublication(Publication publication) throws IntactClonerException {
  if (publication == null) return null;
  Publication clone = new Publication();
  clonerManager.addClone(publication, clone);
  if (isCollectionClonable(publication.getExperiments())) {
    Collection<Experiment> experiments = IntactCore.ensureInitializedExperiments(publication);
    for (Experiment e : experiments) {
      clone.addExperiment(clone(e));
    }
  }
  if (isCollectionClonable(publication.getLifecycleEvents())) {
    Collection<LifecycleEvent> events = IntactCore.ensureInitializedLifecycleEvents(publication);
    for (LifecycleEvent event : events) {
      clone.addLifecycleEvent(clone(event));
    }
  }
  clone.setStatus(clone(publication.getStatus()));
  clone.setCurrentOwner(clone(publication.getCurrentOwner()));
  clone.setCurrentReviewer(clone(publication.getCurrentReviewer()));
  return clone;
}

public Publication clonePublication(Publication publication) throws IntactClonerException {
  if (publication == null) return null;
  Publication clone = new Publication();
  clonerManager.addClone(publication, clone);
  if (isCollectionClonable(publication.getExperiments())) {
    Collection<Experiment> experiments = IntactCore.ensureInitializedExperiments(publication);
    for (Experiment e : experiments) {
      clone.addExperiment(clone(e));
    }
  }
  if (isCollectionClonable(publication.getLifecycleEvents())) {
    Collection<LifecycleEvent> events = IntactCore.ensureInitializedLifecycleEvents(publication);
    for (LifecycleEvent event : events) {
      clone.addLifecycleEvent(clone(event));
    }
  }
  clone.setStatus(clone(publication.getStatus()));
  clone.setCurrentOwner(clone(publication.getCurrentOwner()));
  clone.setCurrentReviewer(clone(publication.getCurrentReviewer()));
  return clone;
}

Javadoc

Ensures that the lifecycle events are initialized.

Popular methods of IntactCore

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How to use ensureInitializedLifecycleEventsmethodin uk.ac.ebi.intact.core.persister.IntactCore

Best Java code snippets using uk.ac.ebi.intact.core.persister.IntactCore.ensureInitializedLifecycleEvents (Showing top 4 results out of 315)

How to use
ensureInitializedLifecycleEvents
method
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uk.ac.ebi.intact.core.persister.IntactCore