Public

ckeckExperimentParentName

createAttributeList

generate the bibliographical reference of the Experiment out of the Xref having
the CvDatabase pubme

createBibRef

createConfidence

Generate and add to the given element the Xrefs of the experiment (but no
pubmed). 
The given set of

createExperimentXrefs

createNames

get the value what will be used as ID of the experiment.

getExperimentId

getInstance

DateTime

Creating JSON documents from java classes using gson

A Rectangle specifies an area in a coordinate space that is enclosed by the 
Rectangle object's top-

java.awt.Rectangle

java.awt.image.Kernel

A filter is an object that performs filtering tasks on either the request to a
resource (a servlet o

javax.servlet.Filter

Defines the contract between a returned instance and the runtime when an
application needs to provid

javax.ws.rs.core.Response

Factory that creates instances of DateTimeFormatter from patterns and styles. 
Datetime formatting i

org.joda.time.format.DateTimeFormat

scala.Option

notifyDataSetChanged

Creates and executes a periodic action that becomes enabled first after the
given initial delay, and

scheduleAtFixedRate

addToBackStack

/**
     * Generated an experimentDescription out of an IntAct Experiment.
     *
     * @param session
     * @param parent     the Element to which we will add the experimentDescription.
     * @param experiment the IntAct experiment that we convert to PSI.
     *
     * @return the generated experimentDescription Element.
     */

"You must give a non null UserSessionDownload."

"You must give a non null parent to build an experimentDescription."

"You must give a <experimentList> to build a "

"You must give a non null Experiment to build an experimentDescription."

//       names bibref xref hostOrganism interactionDetectionMethod participantIdentificationMethod

//       featureDetectionMethod confidenceList attributeList

// TODO what if no pubmed Xref ... no bibRef section ?

// TODO and an attributeList is now attached to the bibRef

// 7. Generating OPTIONAL interactionDetectionMethod ... mapped to Experiment.CvInteraction.

// 8. Generating OPTIONAL participantIdentificationMethod ... mapped to Experiment.CvIdentification.

// note: it was called participantDetection in PSI1

// 9. Generating OPTIONAL featureDetectionMethod...

// note: it was called featureDetection in PSI1

// actually, we have (so far) nothing like that in the IntAct Experiment object ... skip that tag.

// 11. Generating attributeList (if any)...

// 12. Attaching the newly created element to the parent...

How to use createNamesmethodin uk.ac.ebi.intact.application.dataConversion.psiDownload.xmlGenerator.psi2.Experiment2xmlPSI2

Best Java code snippets using uk.ac.ebi.intact.application.dataConversion.psiDownload.xmlGenerator.psi2.Experiment2xmlPSI2.createNames (Showing top 3 results out of 315)

How to use
createNames
method
in
uk.ac.ebi.intact.application.dataConversion.psiDownload.xmlGenerator.psi2.Experiment2xmlPSI2