Public

createAttributeList

createConfidence

createDissociationConstant

Generate the xref tag of the given protein. That content is attached to the
given parent Element. 
 

createInteractionXrefs

createNames

getInstance

Connection

Reading from database using SQL prepared statement

A Rectangle specifies an area in a coordinate space that is enclosed by the 
Rectangle object's top-

java.awt.Rectangle

Thrown to indicate that a malformed URL has occurred. Either no legal protocol
could be found in a s

java.net.MalformedURLException

A charset is a named mapping between Unicode characters and byte sequences.
Every Charset can decode

java.nio.charset.Charset

 GregorianCalendar is a concrete subclass of Calendarand provides the standard
calendar used by most

java.util.GregorianCalendar

A Map is a data structure consisting of a set of keys and values in which each
key is mapped to a si

java.util.Map

java.util.stream.Collectors

Return the contained value, if present, otherwise throw an exception to be
created by the provided s

orElseThrow

getExternalFilesDir

findViewById

/**
     * Generated an interaction out of an IntAct Interaction.
     *
     * @param session
     * @param parent      the Element to which we will add the proteinInteractor.
     * @param interaction the IntAct Interaction that we convert to PSI.
     *
     * @return the generated interaction Element.
     */

"You must give a non null UserSessionDownload."

"You must give a non null parent to build an "

"You must give a <interactionList> to build a "

"You must give a non null Interaction to build an "

// NOTE: PSI v1.0 only supports interaction having 2 participant or more. As a consequence, we don't generate

//       PSI content if such case occur and generate a warning message, that the user will be able to collect

// we can't generate that interaction ...

"WARNING: could not generate PSI-MI content for interaction ("

"at least 2 participants, that interaction contains "

// NOTE: names availabilityRef availabilityDescription experimentList participantList interactionType

// only generate it if the definition doesn't exist.

// add the experiment definition to the global list of experiments

// add an experimentRef to the local list.

// CvInteractionType is optional in the intact model.

// 11. Generating dissociation constant (if any)...

// 11. Attaching the newly created element to the parent...

How to use createConfidencemethodin uk.ac.ebi.intact.application.dataConversion.psiDownload.xmlGenerator.psi1.Interaction2xmlPSI1

Best Java code snippets using uk.ac.ebi.intact.application.dataConversion.psiDownload.xmlGenerator.psi1.Interaction2xmlPSI1.createConfidence (Showing top 3 results out of 315)

How to use
createConfidence
method
in
uk.ac.ebi.intact.application.dataConversion.psiDownload.xmlGenerator.psi1.Interaction2xmlPSI1