How to use
isNegative
method
in
uk.ac.ebi.intact.application.dataConversion.psiDownload.xmlGenerator.Interaction2xmlCommons

Best Java code snippets using uk.ac.ebi.intact.application.dataConversion.psiDownload.xmlGenerator.Interaction2xmlCommons.isNegative (Showing top 3 results out of 315)

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}

/**
 * Generated a negative flag if there is one specified annotation in the Interaction or one of its Experiment.
 *
 * @param session     the user session.
 * @param parent      the parent to which we attach the attributeList, and then the attribute.
 * @param interaction the interaction from which we will get the dissociation constant.
 *
 * @return the created flag. May be null.
 *
 * @see uk.ac.ebi.intact.model.Annotation
 * @see uk.ac.ebi.intact.model.Interaction
 * @see uk.ac.ebi.intact.model.Experiment
 */
public Element createNegativeFlag( UserSessionDownload session, Element parent, Interaction interaction ) {
  // TODO test it
  Element element = null;
  if ( isNegative( interaction ) ) {
    element = session.createElement( "negative" );
    Text negativeText = session.createTextNode( "true" );
    // add the text to the node
    element.appendChild( negativeText );
    // add the node to the parent
    parent.appendChild( element );
  }
  return element;
}

/**
 * Generated a negative flag if there is one specified annotation in the Interaction or one of its Experiment.
 *
 * @param session     the user session.
 * @param parent      the parent to which we attach the attributeList, and then the attribute.
 * @param interaction the interaction from which we will get the dissociation constant.
 *
 * @return the created flag. May be null.
 *
 * @see uk.ac.ebi.intact.model.Annotation
 * @see uk.ac.ebi.intact.model.Interaction
 * @see uk.ac.ebi.intact.model.Experiment
 */
public Element createNegativeFlag( UserSessionDownload session, Element parent, Interaction interaction ) {
  // TODO test it
  Element element = null;
  if ( isNegative( interaction ) ) {
    element = session.createElement( "negative" );
    Text negativeText = session.createTextNode( "true" );
    // add the text to the node
    element.appendChild( negativeText );
    // add the node to the parent
    parent.appendChild( element );
  }
  return element;
}

/**
 * Generated a negative flag if there is one specified annotation in the Interaction or one of its Experiment.
 *
 * @param session     the user session.
 * @param parent      the parent to which we attach the attributeList, and then the attribute.
 * @param interaction the interaction from which we will get the dissociation constant.
 *
 * @return the created flag. May be null.
 *
 * @see uk.ac.ebi.intact.model.Annotation
 * @see uk.ac.ebi.intact.model.Interaction
 * @see uk.ac.ebi.intact.model.Experiment
 */
public Element createNegativeFlag( UserSessionDownload session, Element parent, Interaction interaction ) {
  // TODO test it
  Element element = null;
  if ( isNegative( interaction ) ) {
    element = session.createElement( "negative" );
    Text negativeText = session.createTextNode( "true" );
    // add the text to the node
    element.appendChild( negativeText );
    // add the node to the parent
    parent.appendChild( element );
  }
  return element;
}

Javadoc

Answers the question: is that AnnotatedObject (Interaction, Experiment) annotated as negative ?

Popular methods of Interaction2xmlCommons

createDissociationConstant
Generated a dissociation constant in the attributeList only if there is one specified in the Interac
createInteractionXrefs
Generate the xref tag of the given protein. That content is attached to the given parent Element.
createNegativeFlag
Generated a negative flag if there is one specified annotation in the Interaction or one of its Expe
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How to use isNegativemethodin uk.ac.ebi.intact.application.dataConversion.psiDownload.xmlGenerator.Interaction2xmlCommons

Best Java code snippets using uk.ac.ebi.intact.application.dataConversion.psiDownload.xmlGenerator.Interaction2xmlCommons.isNegative (Showing top 3 results out of 315)

How to use
isNegative
method
in
uk.ac.ebi.intact.application.dataConversion.psiDownload.xmlGenerator.Interaction2xmlCommons