uk.ac.ebi.intact.application.dataConversion.psiDownload.xmlGenerator.Interaction2xmlCommons.getInstance java code examples

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private Element createDissociationConstant( UserSessionDownload session, Element parent, Interaction interaction ) {
  return Interaction2xmlCommons.getInstance().createDissociationConstant( session, parent, interaction );
}

private Element createNegativeFlag( UserSessionDownload session, Element parent, Interaction interaction ) {
  return Interaction2xmlCommons.getInstance().createNegativeFlag( session, parent, interaction );
}

private Element createNegativeFlag( UserSessionDownload session, Element parent, Interaction interaction ) {
  return Interaction2xmlCommons.getInstance().createNegativeFlag( session, parent, interaction );
}

private Element createDissociationConstant( UserSessionDownload session, Element parent, Interaction interaction ) {
  return Interaction2xmlCommons.getInstance().createDissociationConstant( session, parent, interaction );
}

private Element createDissociationConstant( UserSessionDownload session, Element parent, Interaction interaction ) {
  return Interaction2xmlCommons.getInstance().createDissociationConstant( session, parent, interaction );
}

private Element createDissociationConstant( UserSessionDownload session, Element parent, Interaction interaction ) {
  return Interaction2xmlCommons.getInstance().createDissociationConstant( session, parent, interaction );
}

private Element createDissociationConstant( UserSessionDownload session, Element parent, Interaction interaction ) {
  return Interaction2xmlCommons.getInstance().createDissociationConstant( session, parent, interaction );
}

private Element createNegativeFlag( UserSessionDownload session, Element parent, Interaction interaction ) {
  return Interaction2xmlCommons.getInstance().createNegativeFlag( session, parent, interaction );
}

private Element createDissociationConstant( UserSessionDownload session, Element parent, Interaction interaction ) {
  return Interaction2xmlCommons.getInstance().createDissociationConstant( session, parent, interaction );
}

private Element createNegativeFlag( UserSessionDownload session, Element parent, Interaction interaction ) {
  return Interaction2xmlCommons.getInstance().createNegativeFlag( session, parent, interaction );
}

private Element createNegativeFlag( UserSessionDownload session, Element parent, Interaction interaction ) {
  return Interaction2xmlCommons.getInstance().createNegativeFlag( session, parent, interaction );
}

private Element createDissociationConstant( UserSessionDownload session, Element parent, Interaction interaction ) {
  return Interaction2xmlCommons.getInstance().createDissociationConstant( session, parent, interaction );
}

private Element createDissociationConstant( UserSessionDownload session, Element parent, Interaction interaction ) {
  return Interaction2xmlCommons.getInstance().createDissociationConstant( session, parent, interaction );
}

private Element createNegativeFlag( UserSessionDownload session, Element parent, Interaction interaction ) {
  return Interaction2xmlCommons.getInstance().createNegativeFlag( session, parent, interaction );
}

private Element createDissociationConstant( UserSessionDownload session, Element parent, Interaction interaction ) {
  return Interaction2xmlCommons.getInstance().createDissociationConstant( session, parent, interaction );
}

/**
 * Generate the xref tag of the given protein. That content is attached to the given parent Element. <br>
 * <pre>
 *   Rules:
 *   -----
 *           primaryRef:   is the AC of the interaction object
 *           secondaryRef: any other Xrefs
 * </pre>
 *
 * @param session
 * @param parent      the interaction Element to which we will attach the Xref Element and its content.
 * @param interaction the IntAct Interaction from which we get the Xref that will be used to generate the PSI XML.
 *
 * @return the xref tag and its attached content.
 */
private Element createInteractionXrefs( UserSessionDownload session, Element parent, Interaction interaction ) {
  return Interaction2xmlCommons.getInstance().createInteractionXrefs( session, parent, interaction );
}

/**
 * Generate the xref tag of the given protein. That content is attached to the given parent Element. <br>
 * <pre>
 *   Rules:
 *   -----
 *           primaryRef:   is the AC of the interaction object
 *           secondaryRef: any other Xrefs
 * </pre>
 *
 * @param session
 * @param parent      the interaction Element to which we will attach the Xref Element and its content.
 * @param interaction the IntAct Interaction from which we get the Xref that will be used to generate the PSI XML.
 *
 * @return the xref tag and its attached content.
 */
private Element createInteractionXrefs( UserSessionDownload session, Element parent, Interaction interaction ) {
  return Interaction2xmlCommons.getInstance().createInteractionXrefs( session, parent, interaction );
}

/**
 * Generate the xref tag of the given protein. That content is attached to the given parent Element. <br>
 * <pre>
 *   Rules:
 *   -----
 *           primaryRef:   is the AC of the interaction object
 *           secondaryRef: any other Xrefs
 * </pre>
 *
 * @param session
 * @param parent      the interaction Element to which we will attach the Xref Element and its content.
 * @param interaction the IntAct Interaction from which we get the Xref that will be used to generate the PSI XML.
 *
 * @return the xref tag and its attached content.
 */
private Element createInteractionXrefs( UserSessionDownload session, Element parent, Interaction interaction ) {
  return Interaction2xmlCommons.getInstance().createInteractionXrefs( session, parent, interaction );
}

/**
 * Generate the xref tag of the given protein. That content is attached to the given parent Element. <br>
 * <pre>
 *   Rules:
 *   -----
 *           primaryRef:   is the AC of the interaction object
 *           secondaryRef: any other Xrefs
 * </pre>
 *
 * @param session
 * @param parent      the interaction Element to which we will attach the Xref Element and its content.
 * @param interaction the IntAct Interaction from which we get the Xref that will be used to generate the PSI XML.
 *
 * @return the xref tag and its attached content.
 */
private Element createInteractionXrefs( UserSessionDownload session, Element parent, Interaction interaction ) {
  return Interaction2xmlCommons.getInstance().createInteractionXrefs( session, parent, interaction );
}

/**
 * Generate the xref tag of the given protein. That content is attached to the given parent Element. <br>
 * <pre>
 *   Rules:
 *   -----
 *           primaryRef:   is the AC of the interaction object
 *           secondaryRef: any other Xrefs
 * </pre>
 *
 * @param session
 * @param parent      the interaction Element to which we will attach the Xref Element and its content.
 * @param interaction the IntAct Interaction from which we get the Xref that will be used to generate the PSI XML.
 *
 * @return the xref tag and its attached content.
 */
private Element createInteractionXrefs( UserSessionDownload session, Element parent, Interaction interaction ) {
  return Interaction2xmlCommons.getInstance().createInteractionXrefs( session, parent, interaction );
}

Popular methods of Interaction2xmlCommons

createDissociationConstant
Generated a dissociation constant in the attributeList only if there is one specified in the Interac
createInteractionXrefs
Generate the xref tag of the given protein. That content is attached to the given parent Element.
createNegativeFlag
Generated a negative flag if there is one specified annotation in the Interaction or one of its Expe
isNegative
Answers the question: is that AnnotatedObject (Interaction, Experiment) annotated as negative ?

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How to use getInstancemethodin uk.ac.ebi.intact.application.dataConversion.psiDownload.xmlGenerator.Interaction2xmlCommons

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