private ValueSet getValueSet(QuestionnaireResponse theAnswers, Reference theQuestionnaireRef) { ValueSet retVal; if (theQuestionnaireRef.getReferenceElement().isLocal()) { retVal = (ValueSet) theQuestionnaireRef.getResource(); if (retVal == null) { for (Resource next : theAnswers.getContained()) { if (theQuestionnaireRef.getReferenceElement().getValue().equals(next.getId())) { retVal = (ValueSet) next; } } } } else { retVal = myWorkerCtx.fetchResource(ValueSet.class, theQuestionnaireRef.getReferenceElement().getValue()); } return retVal; }
private Questionnaire getQuestionnaire(QuestionnaireResponse theAnswers, Reference theQuestionnaireRef) { Questionnaire retVal; if (theQuestionnaireRef.getReferenceElement().isLocal()) { retVal = (Questionnaire) theQuestionnaireRef.getResource(); if (retVal == null) { for (Resource next : theAnswers.getContained()) { if (theQuestionnaireRef.getReferenceElement().getValue().equals(next.getId())) { retVal = (Questionnaire) next; } } } } else { retVal = myWorkerCtx.fetchResource(Questionnaire.class, theQuestionnaireRef.getReferenceElement().getValue()); } return retVal; }
private String getSubjectReference(Resource resource, Function<Resource, Reference> f) { Reference reference = f.apply(resource); if (reference == null) { throw FhirUtils.unprocessableEntity( OperationOutcome.IssueSeverity.ERROR, OperationOutcome.IssueType.INVALID, ErrorCode.UNKNOWN_PATIENT_ID.getOpcode(), null, "Empty Patient reference in resource %s", resource ); } // Could be contained resources if (reference.getResource() != null) { Patient patient = (Patient) reference.getResource(); return patient.getIdentifier().get(0).getValue(); } return reference.getReference(); }
private String getSubjectReference(Resource resource, Function<Resource, Reference> f) { Reference reference = f.apply(resource); if (reference == null) { throw FhirUtils.unprocessableEntity( OperationOutcome.IssueSeverity.ERROR, OperationOutcome.IssueType.INVALID, ErrorCode.UNKNOWN_PATIENT_ID.getOpcode(), null, "Empty Patient reference in resource %s", resource ); } // Could be contained resources if (reference.getResource() != null) { Patient patient = (Patient) reference.getResource(); return patient.getIdentifier().get(0).getValue(); } return reference.getReference(); }
public void enrichDatasetFromDocumentManifest(DocumentManifest documentManifest) { Reference reference = documentManifest.getSubject(); getPatientIds().add(reference.getResource() != null ? reference.getResource().getIdElement().getValue() : reference.getReference()); // If available, use the documentManifest identifier as documentManifestUuid if (!documentManifest.getIdentifier().isEmpty()) { this.documentManifestUuid = documentManifest.getIdentifier().get(0).getValue(); } } }
private Questionnaire getQuestionnaire(QuestionnaireResponse theAnswers, Reference theQuestionnaireRef) { Questionnaire retVal; if (theQuestionnaireRef.getReferenceElement().isLocal()) { retVal = (Questionnaire) theQuestionnaireRef.getResource(); if (retVal == null) { for (Resource next : theAnswers.getContained()) { if (theQuestionnaireRef.getReferenceElement().getValue().equals(next.getId())) { retVal = (Questionnaire) next; } } } } else { retVal = myWorkerCtx.fetchResource(Questionnaire.class, theQuestionnaireRef.getReferenceElement().getValue()); } return retVal; }
private ValueSet getValueSet(QuestionnaireResponse theAnswers, Reference theQuestionnaireRef) { ValueSet retVal; if (theQuestionnaireRef.getReferenceElement().isLocal()) { retVal = (ValueSet) theQuestionnaireRef.getResource(); if (retVal == null) { for (Resource next : theAnswers.getContained()) { if (theQuestionnaireRef.getReferenceElement().getValue().equals(next.getId())) { retVal = (ValueSet) next; } } } } else { retVal = myWorkerCtx.fetchResource(ValueSet.class, theQuestionnaireRef.getReferenceElement().getValue()); } return retVal; }