public void toNewHampshireX( final Phylogeny[] trees, final File out_file, final String separator ) throws IOException { final StringBuffer sb = new StringBuffer(); for( final Phylogeny element : trees ) { sb.append( toNewHampshireX( element ) ); sb.append( separator ); } writeToFile( sb, out_file ); }
public void toNewHampshireX( final List<Phylogeny> trees, final File out_file, final String separator ) throws IOException { final Iterator<Phylogeny> it = trees.iterator(); final StringBuffer sb = new StringBuffer(); while ( it.hasNext() ) { sb.append( toNewHampshireX( it.next() ) ); sb.append( separator ); } writeToFile( sb, out_file ); }
public void toNewHampshire( final List<Phylogeny> trees, final boolean write_distance_to_parent, final File out_file, final String separator ) throws IOException { final Iterator<Phylogeny> it = trees.iterator(); final StringBuffer sb = new StringBuffer(); while ( it.hasNext() ) { sb.append( toNewHampshire( it.next(), write_distance_to_parent ) ); sb.append( separator ); } writeToFile( sb, out_file ); }
public void toNewHampshire( final Phylogeny tree, final boolean write_distance_to_parent, final NH_CONVERSION_SUPPORT_VALUE_STYLE svs, final File out_file ) throws IOException { writeToFile( toNewHampshire( tree, write_distance_to_parent, svs ), out_file ); }
public void toNewHampshire( final Phylogeny[] trees, final boolean write_distance_to_parent, final File out_file, final String separator ) throws IOException { final StringBuffer sb = new StringBuffer(); for( final Phylogeny element : trees ) { sb.append( toNewHampshire( element, write_distance_to_parent ) ); sb.append( separator ); } writeToFile( sb, out_file ); }
public void toNewHampshireX( final Phylogeny tree, final File out_file ) throws IOException { writeToFile( toNewHampshireX( tree ), out_file ); }