public PhylogenyWriter() { setIndentPhyloxml( INDENT_PHYLOXML_DEAFULT ); setNhConversionSupportStyle( NH_CONVERSION_SUPPORT_VALUE_STYLE.NONE ); }
public StringBuffer toNewHampshire( final Phylogeny tree, final boolean nh_write_distance_to_parent, final NH_CONVERSION_SUPPORT_VALUE_STYLE svs ) throws IOException { setOutputFormt( FORMAT.NH ); setNhConversionSupportStyle( svs ); setWriteDistanceToParentInNH( nh_write_distance_to_parent ); return getOutput( tree ); }