public String getFilterID(int instrumentIndex, int filterIndex) { // Parents: {u'Instrument': {u'OME': None}} // ID is not a reference return root.getInstrument(instrumentIndex).getFilter(filterIndex).getID(); }
public String getFilterID(int instrumentIndex, int filterIndex) { // Parents: {u'Instrument': {u'OME': None}} // ID is not a reference return root.getInstrument(instrumentIndex).getFilter(filterIndex).getID(); }
public String getFilterSetExcitationFilterRef(int instrumentIndex, int filterSetIndex, int excitationFilterRefIndex) { // Parents: {u'Instrument': {u'OME': None}} // ExcitationFilterRef is reference and occurs more than once return root.getInstrument(instrumentIndex).getFilterSet(filterSetIndex).getLinkedExcitationFilter(excitationFilterRefIndex).getID(); }
public String getFilterSetEmissionFilterRef(int instrumentIndex, int filterSetIndex, int emissionFilterRefIndex) { // Parents: {u'Instrument': {u'OME': None}} // EmissionFilterRef is reference and occurs more than once return root.getInstrument(instrumentIndex).getFilterSet(filterSetIndex).getLinkedEmissionFilter(emissionFilterRefIndex).getID(); }
public String getFilterSetEmissionFilterRef(int instrumentIndex, int filterSetIndex, int emissionFilterRefIndex) { // Parents: {u'Instrument': {u'OME': None}} // EmissionFilterRef is reference and occurs more than once return root.getInstrument(instrumentIndex).getFilterSet(filterSetIndex).getLinkedEmissionFilter(emissionFilterRefIndex).getID(); }
public String getFilterSetExcitationFilterRef(int instrumentIndex, int filterSetIndex, int excitationFilterRefIndex) { // Parents: {u'Instrument': {u'OME': None}} // ExcitationFilterRef is reference and occurs more than once return root.getInstrument(instrumentIndex).getFilterSet(filterSetIndex).getLinkedExcitationFilter(excitationFilterRefIndex).getID(); }
public String getLightPathEmissionFilterRef(int imageIndex, int channelIndex, int emissionFilterRefIndex) { // Parents: {u'Channel': {u'Pixels': {u'Image': {u'OME': None}}}} // EmissionFilterRef is reference and occurs more than once return root.getImage(imageIndex).getPixels().getChannel(channelIndex).getLightPath().getLinkedEmissionFilter(emissionFilterRefIndex).getID(); }
public String getLightPathExcitationFilterRef(int imageIndex, int channelIndex, int excitationFilterRefIndex) { // Parents: {u'Channel': {u'Pixels': {u'Image': {u'OME': None}}}} // ExcitationFilterRef is reference and occurs more than once return root.getImage(imageIndex).getPixels().getChannel(channelIndex).getLightPath().getLinkedExcitationFilter(excitationFilterRefIndex).getID(); }
public String getLightPathEmissionFilterRef(int imageIndex, int channelIndex, int emissionFilterRefIndex) { // Parents: {u'Channel': {u'Pixels': {u'Image': {u'OME': None}}}} // EmissionFilterRef is reference and occurs more than once return root.getImage(imageIndex).getPixels().getChannel(channelIndex).getLightPath().getLinkedEmissionFilter(emissionFilterRefIndex).getID(); }
public String getLightPathExcitationFilterRef(int imageIndex, int channelIndex, int excitationFilterRefIndex) { // Parents: {u'Channel': {u'Pixels': {u'Image': {u'OME': None}}}} // ExcitationFilterRef is reference and occurs more than once return root.getImage(imageIndex).getPixels().getChannel(channelIndex).getLightPath().getLinkedExcitationFilter(excitationFilterRefIndex).getID(); }
@Test(dependsOnMethods={"testValidFilterSetNode"}) public void testValidEmissionFilterNode() { Filter emFilter = ome.getInstrument(0).getFilter(0); assertNotNull(emFilter); assertEquals(EM_FILTER_ID, emFilter.getID()); assertEquals(EM_FILTER_TYPE, emFilter.getType()); FilterSet filterSet = ome.getInstrument(0).getDichroic(0).getLinkedFilterSet(0); assertEquals(EM_FILTER_ID, filterSet.getLinkedEmissionFilter(0).getID()); }
@Test(dependsOnMethods={"testValidFilterSetNode"}) public void testValidExcitationFilter() { Filter exFilter = ome.getInstrument(0).getFilter(1); assertNotNull(exFilter); assertEquals(EX_FILTER_ID, exFilter.getID()); assertEquals(EX_FILTER_TYPE, exFilter.getType()); FilterSet filterSet = ome.getInstrument(0).getDichroic(0).getLinkedFilterSet(0); assertEquals(EX_FILTER_ID, filterSet.getLinkedExcitationFilter(0).getID()); }