@Transient public String getSequence(Collection<SequenceChunk> seqChunks) { if ( ( null == seqChunks ) || 0 == ( seqChunks.size() ) ) { return null; } StringBuilder sequence = new StringBuilder(); for ( SequenceChunk sequenceChunk : seqChunks ) { sequence.append( sequenceChunk.getSequenceChunk() ); } return sequence.toString(); }
protected void removeSequenceChunk( SequenceChunk sequenceChunk ) { boolean removed = this.sequenceChunks.remove( sequenceChunk ); if ( removed ) { sequenceChunk.setParent( this ); } }
sc.setSequenceChunk( chunk ); sc.setSequenceIndex( i ); addSequenceChunk( sc ); } else { addSequenceChunk( new SequenceChunk( i, chunk ) );
sc.setSequenceChunk( chunk ); sc.setSequenceIndex( i ); addSequenceChunk( sc ); } else { addSequenceChunk( new SequenceChunk( i, chunk ) );
sc.setSequenceChunk( chunk ); sc.setSequenceIndex( i ); addSequenceChunk( sc ); } else { addSequenceChunk( new SequenceChunk( i, chunk ) );
protected void removeSequenceChunk( SequenceChunk sequenceChunk ) { boolean removed = this.sequenceChunks.remove( sequenceChunk ); if ( removed ) { sequenceChunk.setParent( this ); } }
@Transient public String getSequence(Collection<SequenceChunk> seqChunks) { if ( ( null == seqChunks ) || 0 == ( seqChunks.size() ) ) { return null; } StringBuilder sequence = new StringBuilder(); for ( SequenceChunk sequenceChunk : seqChunks ) { sequence.append( sequenceChunk.getSequenceChunk() ); } return sequence.toString(); }
protected void removeSequenceChunk( SequenceChunk sequenceChunk ) { boolean removed = this.sequenceChunks.remove( sequenceChunk ); if ( removed ) { sequenceChunk.setParent( this ); } }
@Transient public String getSequence() { if ( ( null == sequenceChunks ) || 0 == ( sequenceChunks.size() ) ) { return null; } // Re-join the sequence chunks. // The correct ordering is done during retrieval from the database. // It relies on the OJB setting (mapping) StringBuffer sequence = new StringBuffer(); for ( SequenceChunk sequenceChunk : sequenceChunks ) { sequence.append( sequenceChunk.getSequenceChunk() ); } return sequence.toString(); }
protected void addSequenceChunk( SequenceChunk sequenceChunk ) { if ( !this.sequenceChunks.contains( sequenceChunk ) ) { this.sequenceChunks.add( sequenceChunk ); sequenceChunk.setParent( this ); } }
protected void addSequenceChunk( SequenceChunk sequenceChunk ) { if ( !this.sequenceChunks.contains( sequenceChunk ) ) { this.sequenceChunks.add( sequenceChunk ); sequenceChunk.setParent( this ); } }
protected void addSequenceChunk( SequenceChunk sequenceChunk ) { if ( !this.sequenceChunks.contains( sequenceChunk ) ) { this.sequenceChunks.add( sequenceChunk ); sequenceChunk.setParent( this ); } }